PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.K00WP
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 220aa    MW: 25069.7 Da    PI: 5.7534
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.K00WPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309e-103077655
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                   +E++RR++++  +++L +llP+ +   p++ l   + + +A++YIk+L+
  Aradu.K00WP 30 RLIEKNRRNHMKMLYSKLNSLLPNyN---PKEALPLPDQVDEAINYIKNLE 77
                 579*********************66...9999***************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.21E-72281No hitNo description
SuperFamilySSF474593.93E-122394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.4582476IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-102892IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-63077IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00283082IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MNSLVFQYIP IIMDPGSQPS SSTTNKIERR LIEKNRRNHM KMLYSKLNSL LPNYNPKEAL  60
PLPDQVDEAI NYIKNLEEKV KTAKEKKDGL LERMGRKRTR GGGRDGSGCS NTKPPQLEVH  120
ETGSCLEIVM TCGLENQFIF YEIIRILNEE NIDVKSANSS LLGDSMIHVL HAEIPPLLIE  180
FGATKVSERL KRFVNGSASD IELLQPEFWD FEIDTDIWSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100GRKRTRG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.K00WP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015953866.21e-163transcription factor bHLH162
TrEMBLA0A445E0731e-152A0A445E073_ARAHY; Uncharacterized protein
STRINGGLYMA12G12880.14e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-35bHLH family protein