PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.K0VLN
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 251aa    MW: 28746.4 Da    PI: 6.8889
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.K0VLNgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.81.8e-18120174256
                  T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  rk+ ++tkeq   Lee F+++ ++++++++ LAk+l+L+ rqV vWFqNrRa+ k
  Aradu.K0VLN 120 RKKLRLTKEQSALLEENFKNHTTLNQAQKQALAKQLNLKHRQVEVWFQNRRARTK 174
                  78889************************************************98 PP
2HD-ZIP_I/II113.21.7e-36120208190
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                  +kk+rl+keq++lLEe+F+++++L++ +K++la++L+l+ rqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en rL+ke +eLr +
  Aradu.K0VLN 120 RKKLRLTKEQSALLEENFKNHTTLNQAQKQALAKQLNLKHRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLTDENLRLKKELQELR-A 208
                  69*************************************************************************************9.4 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.2E-17102174IPR009057Homeodomain-like
SuperFamilySSF466892.65E-17110177IPR009057Homeodomain-like
PROSITE profilePS5007116.811116176IPR001356Homeobox domain
SMARTSM003899.2E-13118180IPR001356Homeobox domain
PfamPF000467.7E-16120174IPR001356Homeobox domain
CDDcd000863.53E-14120177No hitNo description
PROSITE patternPS000270151174IPR017970Homeobox, conserved site
SMARTSM003406.0E-20176219IPR003106Leucine zipper, homeobox-associated
PfamPF021832.1E-9176209IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MEDEKACITS LTLGLGIGGG GGGYPPKKKQ KMMMIMKNKP IKPVPSLDLT FGDDEAFPKE  60
AIDDDDDDDD DDREEELFIS LNNKRVGEEH SYNNNKHCPN GNNRDDSYND ENNNNNYCSR  120
KKLRLTKEQS ALLEENFKNH TTLNQAQKQA LAKQLNLKHR QVEVWFQNRR ARTKLKQTEV  180
DCEFLKKCCE RLTDENLRLK KELQELRAIK AGPTQSPTPP LYIQLLSSKS SPLTICSSCE  240
ELLKKTKQEN I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118124SRKKLRL
2168176RRARTKLKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.K0VLN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015954666.10.0homeobox-leucine zipper protein HAT22
TrEMBLA0A445DX541e-136A0A445DX54_ARAHY; Uncharacterized protein
STRINGGLYMA15G18320.14e-73(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56642851
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.15e-40HD-ZIP family protein