PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.K21KE

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 109aa MW: 12674.5 Da PI: 10.3047

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.K21KE	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.3	2.1e-12	16	75	30	91
FAR1 30 krtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 + + C++ g+r+++ k+ +r++++ t+Cka+ + ++k +g+w+++++e H+H+l+p Aradu.K21KE 16 YAALHCNRDGYRTSRVKA---PQRRKTVASTNCKARCYLALDKmTGQWRISRVEVSHSHPLNP 75 56789********999...66677788899999999998888**************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.6E-10	16	75	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 109 aa Download sequence Send to blast
MCFGTLEDTR AYYYRYAALH CNRDGYRTSR VKAPQRRKTV ASTNCKARCY LALDKMTGQW 60 RISRVEVSHS HPLNPKLSGM FSANRQLSMH VKDLIQQNDQ ADIRPSKTY

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.K21KE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020989710.1	4e-64	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_025625519.1	4e-64	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YT06	3e-58	A0A444YT06_ARAHY; Uncharacterized protein
TrEMBL	A0A445DZ05	4e-61	A0A445DZ05_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF29723	2	2