PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.K41I0
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 312aa    MW: 33878.8 Da    PI: 9.0775
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.K41I0genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-19130179255
          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa a+++a ++++g
  Aradu.K41I0 130 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFNTAEAAAIAYDQASLRFRG 179
                  8********.**********66.....56************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.6E-31129188IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-22130188IPR016177DNA-binding domain
PROSITE profilePS5103224.46130187IPR001471AP2/ERF domain
CDDcd000185.79E-32130189No hitNo description
SMARTSM003801.8E-34130193IPR001471AP2/ERF domain
PfamPF008471.2E-12130179IPR001471AP2/ERF domain
PRINTSPR003674.7E-11131142IPR001471AP2/ERF domain
PRINTSPR003674.7E-11153169IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005730Cellular Componentnucleolus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MQPMIMFPGL NKEEEMYTMV EALTHVVRGE IPQEAADVAV TSNMASVSAT PSTSSSSYGL  60
NSNLKRSRED DIPFLASSSA AIPPISELAI NGKTRSERSE MGDDAIVYEY RTDLKKNDEE  120
KRKNNEGKRK YRGVRQRPWG KWAAEIRDPF KAARVWLGTF NTAEAAAIAY DQASLRFRGN  180
KAKLNFPENV RVKQPPPPTA FTISHTASSS SSGAYVPLPP STVEASPPKF YDFSSEFSDF  240
PISLYDQMFV SSAMVSHIQA SSASSPAASN SSSSSVFAYS VTSAPQATPI PSVYSAKLPP  300
WSSSGNSSSP SR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-22129190163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00289DAPTransfer from AT2G33710Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.K41I0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015955956.10.0ethylene-responsive transcription factor ABR1
TrEMBLA0A445DSC80.0A0A445DSC8_ARAHY; Uncharacterized protein
TrEMBLA0A445DSE10.0A0A445DSE1_ARAHY; Uncharacterized protein
STRINGGLYMA05G32040.14e-68(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49333254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.13e-31ERF family protein