PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.K7LHY
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 500aa    MW: 55675.3 Da    PI: 5.5501
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.K7LHYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.6e-13305351354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h + E++RR+++N ++  Lr+l+P++     +K++ a+++  A+eYI++L
  Aradu.K7LHY 305 TKHFATEKQRREQLNGKYKILRSLIPSP-----TKMDRASVVGDAIEYIREL 351
                  78**************************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.167302351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-15303369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-12305355IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-11305351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.03E-11305355No hitNo description
SMARTSM003531.0E-11308357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MHEQPGCFDP NTMAEGVSTP KLKDTFPQTL SDPSSSPSPL IVVGNTTNSN NNLEENIRLS  60
MEELSYHHQQ EDVSNYVNGV TATTIDIPHP QHLGLNMGNS YNNNINMDSH LVQHEIDILP  120
YQQPTWDPNV QEMQDMGYTN HSEHQPHDQQ FQQTEAQNCS QSYNPSSILD PPYPSQDLLN  180
LLHLPRCSTS SLLANPAICI ANKTQNFQNP MGFLGDLPIG SDNTSASSVL YDPLLHLNLP  240
PQPPALRELF QSLPRGYSLP TNSRSGSLFG GGDEIEGDGS QLDMGVLDFN RVTASVGKGR  300
EGKGTKHFAT EKQRREQLNG KYKILRSLIP SPTKMDRASV VGDAIEYIRE LLRTVNELKL  360
LVEKKRYGRE RCKRQKAEDD AAESCNIKPF SDPDGCIRTS WLQRKSKDSE VDVRIVDDDV  420
TIKLFQRKKI NCLLSVAKVL DELQLELHHV AGGHVGEYCS FLFNSKIIEG SSVYASAIAN  480
RVIDVMDTQY AAAVPHTSSY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.K7LHY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015957963.10.0transcription factor bHLH91 isoform X2
TrEMBLA0A445DM170.0A0A445DM17_ARAHY; Uncharacterized protein
STRINGXP_007163873.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.18e-66bHLH family protein