PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.K8XKJ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 449aa    MW: 51600.2 Da    PI: 8.0209
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.K8XKJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1324e-101271704991
         FAR1  49 ekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +++r+ r  trt+C a+l+vk+++  gkw+v+ +++ HnH+l+p
  Aradu.K8XKJ 127 SRSREARLLTRTKCPARLRVKLDYgCGKWKVSCFVESHNHDLTP 170
                  5789999*****************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.4E-7127170IPR004330FAR1 DNA binding domain
SuperFamilySSF577563.14E-5356390IPR001878Zinc finger, CCHC-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MKGVRFIFWN LEIMSHLYAV ARGKIMSRNE DDVKNDSDNY LGDDFDYQPN AEDDAEDEDV  60
DSLDSTSKSE EVCGVKRIAD LMVEDIWNLE FRTEDEACQF YNAYSCWHGF IMRKDDVVRN  120
NQGRIISRSR EARLLTRTKC PARLRVKLDY GCGKWKVSCF VESHNHDLTP PQFAHLVPAN  180
RHLTVTDKVQ NTLIDFMHNL DRALKEYRNN ELIADFKSQC SEPVIITSLE VYERSASCYF  240
TRNIFKEIRN EIQREGALNI KVLSTTLDKV EFSVTALGDP AKNRRVEVDR SKNLFSWTKN  300
AKNEFISTEM PVNNDVERVL KFRVGALASN CNKLCDIACK DLADFDEVQS ELVNKGAPSK  360
RSSWRKKGAC SNCHKYGHYY KCCPNLMQHS MQGNPCDRLE TNASAKDSGF SPERFANSSR  420
SFSVKFEHHS RPKTKPFKKG GTKKFTTTV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.K8XKJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371771e-135HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020963820.11e-150protein FAR1-RELATED SEQUENCE 9-like
RefseqXP_025611697.11e-149protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_029146214.11e-149protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445BU030.0A0A445BU03_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF845424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-11FAR1-related sequence 5