PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KBI7E
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 156aa    MW: 17617.9 Da    PI: 8.1124
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KBI7EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.44.1e-1259125172
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                  kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ +    +++t+++   +C a++ ++  k
  Aradu.KBI7E  59 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISL---TEKTNPTAGLNCPARIYIHTLK 125
                  6***************998776..8889**************99887...8999*************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.3E-959125IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MDHSTSDCQL NPGEVDYEFE SNEVPEVYYI RNDWPVSVVD DEFVPKVGMT FTILEDAGKF  60
YRNYAKAAGF STRVRCTNRK GNEIKNQLIT CSREGKWKSK ISLTEKTNPT AGLNCPARIY  120
IHTLKDSVLG SFQRLCSIIH TPAVQVKQRC SNSTGN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.KBI7E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-151HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.13e-72protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997160.12e-72protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997362.14e-72protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZP796e-96A0A444ZP79_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.14e-06FAR1 family protein