PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KG94L
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 366aa    MW: 41630.2 Da    PI: 7.4066
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KG94LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.66.3e-16269351291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                  fY++YA+ +GF  ++++skk   +g+     + C++  +r ++ ++      t +++ t+C ak++vkk kdgkw++ k++l+HnH+l+p
  Aradu.KG94L 269 FYKRYARLIGFGWKIRTSKKG-FDGRPNYVVLACTRGDRRVSSIST------TLPTQFTKCSAKINVKKGKDGKWMIRKVDLDHNHDLSP 351
                  ****************99987.999999*******98777776655......99999******************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.5E-13269351IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MDLHPETATT SSPTFASIGR RSLKDMSISE LISVLRADFD TVEEVLLARD AKHKAEISPL  60
YEKIELERLT RLRLESELKT KQEEQRCHRC ERTQEGYEML LKEVKKSGLN DYKNNAIIEE  120
LRNTNRELEI QNNKATDELA TIRIRCSQLE NARNVSLATI EKLRVENCKL RKELNKGVNF  180
VVKDEQDKEF NEMDVCGSAS LQRIKDIGQS QSSSGGLFFK VLDMDSCNNV SGDAAFEAVA  240
EVYSESDDDG HLEPVPRMEF DSLEAVQTFY KRYARLIGFG WKIRTSKKGF DGRPNYVVLA  300
CTRGDRRVSS ISTTLPTQFT KCSAKINVKK GKDGKWMIRK VDLDHNHDLS PLNLKYSGNT  360
TISTLI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.KG94L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015958358.10.0uncharacterized protein LOC107482405
TrEMBLA0A445DL100.0A0A445DL10_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2096123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-11FAR1 family protein