PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KN3K2
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 161aa    MW: 18996.1 Da    PI: 9.8142
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KN3K2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.76.7e-0755965191
         FAR1 51 errtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 +  t+++   +C a++ v+ +k  g w++ k++l+H+H+++p
  Aradu.KN3K2 55 QLITNPSAGLNCPARIYVHIMKdVGLWKIFKVVLNHSHPCCP 96
                 4558899999***********999***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.7E-55296IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MQTNYVMDEK FIPKVGMIFK TLEEARKFYK YYSKLASFST KIRNTTRDGD KIKNQLITNP  60
SAGLNCPARI YVHIMKDVGL WKIFKVVLNH SHPCCPGQAE MLKQHRELSM FVRRTIETHE  120
KAEIRTSKTY QSFVVAAGNH CELELYKDRH IWILVYLDHH F
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.KN3K2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172294.11e-78protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_016195668.12e-77protein FAR1-RELATED SEQUENCE 4-like
TrEMBLA0A444WTC41e-97A0A444WTC4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.27e-07FAR1-related sequence 4