PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KPG0T
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 114aa    MW: 13305.5 Da    PI: 10.088
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KPG0TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.25.3e-0840805291
         FAR1 52 rrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                   t+++   +C a++ v+++k  g+w ++k++l+H+H+++p
  Aradu.KPG0T 40 LITNPSAGLNCPARIYVHLMKdVGVWTISKVVLNHSHSCCP 80
                 457899999************99**************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.7E-63980IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MIFETLEKTA KFYKHYSKLA DFSTKIRNMT WDGDKIKNQL ITNPSAGLNC PARIYVHLMK  60
DVGVWTISKV VLNHSHSCCP ERAEMLKKHR ELNMFVHRTI ETHEKAGIRP SKTY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.KPG0T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177749.11e-60uncharacterized protein LOC107620038
RefseqXP_016195732.18e-60protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444XKW55e-63A0A444XKW5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-06FAR1-related sequence 5