PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KT80R
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family M-type_MADS
Protein Properties Length: 69aa    MW: 7809.39 Da    PI: 9.9269
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KT80RgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF34.82.1e-112664341
                 --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
       SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41
                 i++ s  + tf kR +g+lKK e + +LCd+++++ if 
  Aradu.KT80R 26 IDDISSTKATFKKRCAGLLKKLEQIAILCDIQACIAIFC 64
                 788888999**************************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006613.1751663IPR002100Transcription factor, MADS-box
SMARTSM004320.00241668IPR002100Transcription factor, MADS-box
SuperFamilySSF554557.72E-121864IPR002100Transcription factor, MADS-box
PRINTSPR004042.9E-81838IPR002100Transcription factor, MADS-box
PfamPF003196.9E-112664IPR002100Transcription factor, MADS-box
PRINTSPR004042.9E-83853IPR002100Transcription factor, MADS-box
PRINTSPR004042.9E-85369IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
MAVIQANNNN DDEILKIKKR VKLQLIDDIS STKATFKKRC AGLLKKLEQI AILCDIQACI  60
AIFCRIKSF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.KT80R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015964114.11e-25MADS-box transcription factor PHERES 2-like
TrEMBLA0A444Z9N32e-31A0A444Z9N3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15602811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31640.15e-10AGAMOUS-like 92