PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.L1FL0
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 185aa    MW: 20842.6 Da    PI: 8.0765
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.L1FL0genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.44e-07133175140
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegk 40 
                  ++Yn+Y++  GF vr+sk  ++     +g+i+++ f+Cs+eg 
  Aradu.L1FL0 133 DYYNKYGRIKGFLVRRSKVGRRtkqGAEGKIIWQIFMCSREGD 175
                  69*************998766643367889***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.8E-5133176IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MVSQHRRLPP VPETGNQRRC NRRMEPHAKG AGSFGRPVRR RRCTVEENAE LNGAEAQIEI  60
WLSRDADDGM SGKTVPVEEA EAMDSSVPDA DIDAEAGVRI IEGIWFFGAI EFSSLTAKDV  120
LTMEFTSLQA AYDYYNKYGR IKGFLVRRSK VGRRTKQGAE GKIIWQIFMC SREGDIHVLD  180
HAVRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.L1FL0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172821.15e-55protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_016192260.17e-55protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025639519.17e-55protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445EJ265e-61A0A445EJ26_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-06FAR1 family protein