PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.L1T06
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 364aa    MW: 41811.6 Da    PI: 9.5607
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.L1T06genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1514.8e-16689188
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88
                 kfY++YAk vG s+r+++++++  ++ei+++  +Cs+egk +++ +    +++t+++   +C a++ ++  k  g w ++k++ +H+H+
  Aradu.L1T06  6 KFYKDYAKAVGISTRVRSTNRK--ENEIKNQLITCSREGKWKSKISL---TEKTNPTASLNCPARIYIHTLKdVGAWIISKVVPHHSHP 89
                 6****************98887..7779**************99887...89999*************998879**************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.2E-13690IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
RSDAGKFYKD YAKAVGISTR VRSTNRKENE IKNQLITCSR EGKWKSKISL TEKTNPTASL  60
NCPARIYIHT LKDVGAWIIS KVVPHHSHPC GLSKAEMLKQ HRELSMSIRR TIENNEEAGM  120
RSTQRSESMH LFFNKFTTQN SSLIQFVKQY DNCLGSREKA ERESDAADFH TFREVQAQFR  180
GKANCITKLT NSALGYSVYE VEEQVSSSIF NKFVVTYDSV AAEVKCQCLL FESRGILCHQ  240
ALSVLSFEQL SQVSPRYILE RWSKKVKRRH THIKSSHDEP LLEPRSKRFD ELVFCLQNIC  300
EFALESEELT AILYRAYDTV MVEMESLKAK RKGTSSLSHE DANLESVNEL QSPPRIRTRG  360
RPKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.L1T06
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020986710.11e-157protein FAR-RED ELONGATED HYPOCOTYL 3-like
TrEMBLA0A445ET060.0A0A445ET06_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.23e-20far-red elongated hypocotyls 3