PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.L9W8G
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 220aa    MW: 25071.9 Da    PI: 8.7446
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.L9W8GgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.7e-1099126434
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...T CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskap 34 
                   hn  ErrRRdriN+++  L++l+P++   +
  Aradu.L9W8G  99 VHNLSERRRRDRINEKMRALQDLIPNC---N 126
                  6*************************8...3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5029310.0691245IPR013026Tetratricopeptide repeat-containing domain
PROSITE profilePS5000510.621245IPR019734Tetratricopeptide repeat
SuperFamilySSF484523.6E-51465IPR011990Tetratricopeptide-like helical domain
Gene3DG3DSA:1.25.40.105.8E-61462IPR011990Tetratricopeptide-like helical domain
Gene3DG3DSA:4.10.280.102.5E-1292161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-1094162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.69695152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.99E-698129No hitNo description
PfamPF000108.8E-899126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MVLCSQLSVV LDHTFYKCGR AHMALHDIDA AVESFKNALV LEPNDERILG NPNQSLKLKR  60
QETENSECHS EVNDIEEESV GVKKACPTRG VKRSRSAEVH NLSERRRRDR INEKMRALQD  120
LIPNCNKVRL FILSNLEPYL LLLEPKMQPE KQRNETKRQE AWQVYGALLC AVGQCMHEKA  180
KIFSNLLSPP TRASSRPKAM IAMSSMTSLC YNEIYTGVSK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103108ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.L9W8G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311327e-37KT031132.1 Glycine max clone HN_WYQ_58 bHLH transcription factor (Glyma20g22291.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015965549.11e-80transcription factor PIF3 isoform X5
TrEMBLA0A445CSJ55e-74A0A445CSJ5_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.24e-26phytochrome interacting factor 3