PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.LG1HN

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 149aa MW: 17384.6 Da PI: 10.305

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.LG1HN	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.3	7.8e-16	27	113	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY++Y+k + Fs++++++++ ++i+++ vC++egk + + ++ +t+++ +C a++ v+ +k g w ++k++l+H+H+++p Aradu.LG1HN 27 KFYKHYSKLADFSTKIKNMTRD--RDKIKNQLIVCTREGKWKFKISS---ILKTNPSAGLNCLARIYVHIMKdVGLWTISKVVLNHSHPCCP 113 6**************99988..5569**********99877...99***************999*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	6.5E-13	27	113	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence Send to blast
MQTSCVVDEK FVPKVGMIFK KLEEAEKFYK HYSKLADFST KIKNMTRDRD KIKNQLIVCT 60 REGKWKFKIS SILKTNPSAG LNCLARIYVH IMKDVGLWTI SKVVLNHSHP CCPDQAKMLK 120 QHRELSMFSC MRIGIYGFQF TWITTFGPR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.LG1HN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015960283.1	1e-88	protein FAR1-RELATED SEQUENCE 6-like
TrEMBL	A0A445DGY8	2e-85	A0A445DGY8_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	7e-09	FAR1 family protein