PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.LR43J

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 118aa MW: 13542.5 Da PI: 9.7219

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.LR43J	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	41.5	4.3e-13	3	45	49	90
FAR1 49 ekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +++r++++ tr+gC a++++k+++ +gkw+v+++ +HnHel+ Aradu.LR43J 3 DQKREHKVMTRCGCLAEMRIKRKDgSGKWYVSRFLDNHNHELV 45 589999***********************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.4E-10	3	45	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence Send to blast
MADQKREHKV MTRCGCLAEM RIKRKDGSGK WYVSRFLDNH NHELVAGKYG LSDVEIAHLT 60 SLREVGISIP KIYQSFAAHV GDFNLVRFTK QDMYNEVRKQ RSLQNGDVNA AVRYLEGV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.LR43J

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025677407.1	2e-71	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444ZAR3	2e-59	A0A444ZAR3_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9185	2	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-10	FAR1-related sequence 5