PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.LXV06
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 258aa    MW: 29055.8 Da    PI: 7.431
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.LXV06genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-1277124355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++h+e+ErrRR+riN  +++Lr l+ +       K++Ka+iL k+v  +k+Lq
  Aradu.LXV06  77 KNHSEAERRRRERINGHLATLRGLVSST-----DKMDKATILAKVVSQVKELQ 124
                  58*************************7.....6***************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.78674123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-1377126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-1077124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-1378127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.0E-1280129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00203159231No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MVYSFYNSND FSSPGYDVSR LISPSLHDYG ASYGVLEPSH ALILESEKIE QVNNGSEDAR  60
VGKNYENSDA KALAALKNHS EAERRRRERI NGHLATLRGL VSSTDKMDKA TILAKVVSQV  120
KELQRNAMEA SKGLLIPTDF DEVEVEPYED HRSMSYKASI CCDYRPEILF DLRHTLDALE  180
LQLVRAETST LEGRMKNVFV YRCCKGKGDN NNTEACQALA RNVQKALSRV IDKASNALEY  240
SLRASLPCKR RRICLLEN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18287ERRRRE
2248252KRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.LXV06
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015956582.10.0putative transcription factor bHLH107
TrEMBLA0A445DQR60.0A0A445DQR6_ARAHY; Uncharacterized protein
STRINGXP_004505138.11e-102(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF89863143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.14e-34bHLH family protein