PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.M1WMR
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 88aa    MW: 10110.9 Da    PI: 10.1179
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.M1WMRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1293.5e-091174169
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvk 69
                 kfY++Y k vGF +++++++++   ++i+++   Cs+egk +++ +    + +t++   ++C  ++ + 
  Aradu.M1WMR 11 KFYKDYPKLVGFCTKIRNTTRK--GDKIKNQLIICSREGKWKSKISP---TLTTNPLAGINCPTRIYII 74
                 6***************998776..8889*************998776...8999999999999999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.2E-61176IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MTFKTLEEVE KFYKDYPKLV GFCTKIRNTT RKGDKIKNQL IICSREGKWK SKISPTLTTN  60
PLAGINCPTR IYIISKVVLN YSHPSCPD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.M1WMR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016206076.13e-40protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YMX93e-44A0A444YMX9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477