PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.M594W
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 357aa    MW: 40041.1 Da    PI: 7.3057
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.M594WgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-10167212555
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h + Er+RR+++ ++f  L   +P +     kK +K++iL +A+ ++k+L+
  Aradu.M594W 167 HIMTERKRRRELTERFIALSATIPGL-----KKIDKSTILSEAISHVKQLK 212
                  8999**********************.....9*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.992162211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-15165234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.51E-9167216No hitNo description
Gene3DG3DSA:4.10.280.103.6E-15167225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.4E-8167211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.8E-11168217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MGEPCHNYWY SDMGIQDDDI FNQRYKINSS LIVDEDHIIR EIMDHHHHQP AFSSESDNSH  60
SPTNNNQIKG GGSGNTSSFV FNNNNQHAPL LLDMKASTST SSPRSYILSF HDSTVIATTA  120
AAAATPPPPL PSLETYNNNE KRPYQHIEVA LENQAKKVRS SSETLDHIMT ERKRRRELTE  180
RFIALSATIP GLKKIDKSTI LSEAISHVKQ LKQRVKELEE QKKKISVESV SFIIRKSHLM  240
NGTNNKDDEK GAINNKAATS EALLPTVEAR VLKNDVLIRI HCMKQSGIML KILRHLKSFD  300
LSAISNSVLP FGNSTLDITI IAQIGDKFNV TMNDLVKNLR LSILESPNDD EEPHNSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171175RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.M594W
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015938057.10.0transcription factor bHLH18-like isoform X1
TrEMBLA0A445BQK40.0A0A445BQK4_ARAHY; Uncharacterized protein
STRINGGLYMA07G03051.11e-116(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1625679
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-34bHLH family protein