PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.M5D2I

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bZIP

Protein Properties

Length: 327aa MW: 35345.3 Da PI: 9.7863

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.M5D2I	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.2	5.5e-16	257	300	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r++r++kNRe+A rsR+RK+a+++eLe+kv Le+eN++Lk Aradu.M5D2I 257 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLKR-Q 300 79***************************************94.3 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.2E-15	249	300	No hit	No description
SMART	SM00338	4.3E-12	253	325	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.794	255	300	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.1E-12	257	300	IPR004827	Basic-leucine zipper domain
CDD	cd14707	4.18E-24	257	302	No hit	No description
SuperFamily	SSF57959	4.5E-11	257	302	No hit	No description
PROSITE pattern	PS00036	0	260	275	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MGSQGGAVQE AQSGGSGSLA RQGSLYNLTL DEVQNQLGNL GKPLGSMNLD ELLKSVFTAE 60 AGGCGGGGGG GQASSGLGSG TDANIQQQHA QLASVSSLNR QGSLTVSGDL SKKTIDEVWR 120 DMQRKKSGGN SNNNDKKTKE TPPTFGEMTL EDFLVKAGVV AESFATEDNA MSRVDSNVAS 180 QHNVSDQVHW IQYQIPSVQP APHLQHNQHQ KQQNNMIAGY IAGPMSPSSL MGTLSDTQTP 240 GRKRVASGTV VEKTVERRQK RMIKNRESAA RSRARKQAYT QELENKVSRL EEENERLKRQ 300 QEIEKVLPSE PPPEPKRQLR RTSSGPL

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.M5D2I

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015970718.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-103	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A445CRV2	0.0	A0A445CRV2_ARAHY; Uncharacterized protein
STRING	AES81050	1e-127	(Medicago truncatula)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1320	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-100	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]