PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ME4LN
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 355aa    MW: 38343.1 Da    PI: 7.7822
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ME4LNgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.5e-21176225255
          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrd +     + +r++lg+f+tae Aa+a+++a+++++g
  Aradu.ME4LN 176 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEAAARAYDQAALRFRG 225
                  8********.**********66.....56*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.2E-33175234IPR001471AP2/ERF domain
PROSITE profilePS5103225.673176233IPR001471AP2/ERF domain
SMARTSM003804.9E-37176239IPR001471AP2/ERF domain
CDDcd000188.31E-25176235No hitNo description
PfamPF008472.2E-14176225IPR001471AP2/ERF domain
SuperFamilySSF541716.28E-23176234IPR016177DNA-binding domain
PRINTSPR003678.6E-12177188IPR001471AP2/ERF domain
PRINTSPR003678.6E-12199215IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MCIAKVANPQ EKGNKVVEKR ELEVDERINN NNSTLSSSMH MIFPGLNREE EMSAMVSALT  60
HVVSGEVPTS AGDDYSLPTS NMTYGSSTFS NYVVGSGSSS IKRTRQQDDI SFVDHFSSSH  120
GVTSSSPTTI HTTMNRECSR ESGSGSGEVE GENRGRTVYE YRAREENVRE EEPRRKYRGV  180
RQRPWGKWAA EIRDPFKAAR VWLGTFDTAE AAARAYDQAA LRFRGNKAKL NFPENVTLLR  240
HAPPQITASS LVAIPTSTEA IVHSEPLIST TLHGFSFSSS SSAGLYGNFP TMDSTMTVMA  300
SSVASHLRHS SLSSTQASPP FLSSSSAFGS TKQLPAAXLP AAWSSASGNS SSSSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-23175236163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.ME4LN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015945218.10.0ethylene-responsive transcription factor ABR1 isoform X1
TrEMBLA0A445B5I10.0A0A445B5I1_ARAHY; Uncharacterized protein
STRINGXP_004503061.14e-69(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49333254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.15e-27ethylene response factor 110