PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.MIW9U
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 256aa    MW: 28728.4 Da    PI: 8.7631
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.MIW9UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-18555155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                 ++++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  Aradu.MIW9U  5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAILMNG 55
                 59*****999.**********8.....334**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.98E-22563No hitNo description
PROSITE profilePS5103222.036663IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-32664IPR001471AP2/ERF domain
PfamPF008473.5E-11655IPR001471AP2/ERF domain
SMARTSM003801.6E-39669IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-19664IPR016177DNA-binding domain
PRINTSPR003674.5E-10718IPR001471AP2/ERF domain
PRINTSPR003674.5E-102945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MVQAKKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILMNGQNAKT  60
NFPSTKNNQQ SHHHNNNATT TTTSSSSSSC NDDSSFLSPK ALSELLSAKL KKCCGKDPSS  120
PSLTCLRLDA DNSHIGVWQK GPGRHSDSSW VMRVELGSKN HNHQQKQHEG NKVIFPSSPS  180
NNNITNNNNN NTNVVVIGEN DDENRIEEEN RVAMQMIEEL LNWNNYPFGS SSSNNNNNNS  240
QQQQEDQKRN LPCHSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-17563160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPromotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15319479}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.MIW9U
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By wounding in cauline leaves, stems, and siliques, but not in rosette leaves. {ECO:0000269|PubMed:15319479}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1470474e-57BT147047.1 Lotus japonicus clone JCVI-FLLj-20H5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015937463.10.0ethylene-responsive transcription factor SHINE 2-like
SwissprotQ3E9581e-67SHN3_ARATH; Ethylene-responsive transcription factor SHINE 3
TrEMBLA0A445C0W31e-148A0A445C0W3_ARAHY; Uncharacterized protein
STRINGXP_004501327.14e-79(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57633144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.14e-45ERF family protein
Publications ? help Back to Top
  1. Djemal R,Khoudi H
    Isolation and molecular characterization of a novel WIN1/SHN1 ethylene-responsive transcription factor TdSHN1 from durum wheat (Triticum turgidum. L. subsp. durum).
    Protoplasma, 2015. 252(6): p. 1461-73
    [PMID:25687296]
  2. Sadler C, et al.
    Wax and cutin mutants of Arabidopsis: Quantitative characterization of the cuticular transport barrier in relation to chemical composition.
    Biochim. Biophys. Acta, 2016. 1861(9 Pt B): p. 1336-1344
    [PMID:26965486]