PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.MK54V
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 193aa    MW: 22166.1 Da    PI: 5.9096
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.MK54VgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.12.8e-13991553791
         FAR1  37 kegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  ++g+r+++  + ++++r+++++tr+gC a++++k +  +gkw v++++ +HnH+l p
  Aradu.MK54V  99 RQGFRDKKWLEkQDHKREHKVVTRCGCPAEMRIKSRIvTGKWFVARFVDDHNHHLLP 155
                  688888775553578888999**************999****************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.1E-1199155IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MEEVLGCWME GAFADEAVLD GVSERVGDVA FEEEIAQHMG MKDDDVEVAG GQQSVENVMD  60
AAEVMTITAD DFLRMEFNNP KEAARIYEEY SRVKGFAVRQ GFRDKKWLEK QDHKREHKVV  120
TRCGCPAEMR IKSRIVTGKW FVARFVDDHN HHLLPEKFWS TCLRTGGDVI SIKFFKHVSY  180
AGNESNNRRT RVC
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.MK54V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029144539.12e-96protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445DF981e-128A0A445DF98_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.12e-09FAR1-related sequence 7