PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.MN4MZ

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 405aa MW: 44304.3 Da PI: 7.2099

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.MN4MZ	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.2	3.9e-10	262	310	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq Aradu.MN4MZ 262 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 310 58************************....999***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	5.37E-17	257	327	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.08E-11	257	314	No hit	No description
PROSITE profile	PS50888	15.485	259	309	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.1E-16	260	327	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.5E-7	262	310	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.6E-10	265	315	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence Send to blast
MGGHENAMGF HHGNESILTN NVNVSEMDMS SSMSLARSSS DVVVPNSNPF LASSSSWDPI 60 VSLSQSQTFG GSSMVTTHNS DFGNSSSYPF VQYMSDSTNL EGIMVHKIPS FGSGNFSEIV 120 GSFCQEGSSD IPNMGFRPSY NHGNDAGTER ATMNEQSQVE DSITEDGAPG TAPSGNRRKR 180 MLDHDSSFSP NKNAGGDELK DSPRTISDGA KEHEKKAKVE QNVSADLRGK QPAKQSKENS 240 PSGEAPKENF IHVRARRGQA TNSHSLAERV RREKISERMR LLQELVPGCN KITGKAVMLD 300 EIINYVQSLQ QQVEFLSMKL ATVNPELNFD VERILSKEIL QSRLGHGIVG YGVGMNSPHP 360 FSNGSFQGNM AGMPSTSTQF PPLPQVIQNK IKYHKKSNKF RSLWL

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence Send to blast

MGGHENAMGF HHGNESILTN NVNVSEMDMS SSMSLARSSS DVVVPNSNPF LASSSSWDPI  60
VSLSQSQTFG GSSMVTTHNS DFGNSSSYPF VQYMSDSTNL EGIMVHKIPS FGSGNFSEIV  120
GSFCQEGSSD IPNMGFRPSY NHGNDAGTER ATMNEQSQVE DSITEDGAPG TAPSGNRRKR  180
MLDHDSSFSP NKNAGGDELK DSPRTISDGA KEHEKKAKVE QNVSADLRGK QPAKQSKENS  240
PSGEAPKENF IHVRARRGQA TNSHSLAERV RREKISERMR LLQELVPGCN KITGKAVMLD  300
EIINYVQSLQ QQVEFLSMKL ATVNPELNFD VERILSKEIL QSRLGHGIVG YGVGMNSPHP  360
FSNGSFQGNM AGMPSTSTQF PPLPQVIQNK IKYHKKSNKF RSLWL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.MN4MZ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015972550.1	0.0	transcription factor bHLH74 isoform X2
TrEMBL	A0A445CXF4	0.0	A0A445CXF4_ARAHY; Uncharacterized protein
STRING	XP_007160954.1	1e-178	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7585	33	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	7e-70	bHLH family protein