PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.MS5Z0
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 233aa    MW: 27384.9 Da    PI: 4.921
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.MS5Z0genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.51.6e-1163121159
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetr 59 
                  +fYn+YA++ GFs rk++++ks r g  + ++fvC +eg+r +++    + +r++++etr
  Aradu.MS5Z0  63 EFYNRYARTRGFSARKNRTRKS-RAGALKLKNFVCHREGFRPPNNYGiGNLKRKPTPETR 121
                  6*******************99.7777**************9988775445555555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.4E-863119IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MRKLTWIYMD EDDTNVEPMF DYHGFDEGYN IDSLEDIGMI EFWNIRDEDV CHFDFSDVDI  60
AFEFYNRYAR TRGFSARKNR TRKSRAGALK LKNFVCHREG FRPPNNYGIG NLKRKPTPET  120
RWKEVQADLA SVNGRPSMQT CFQQLERSDA NVYTLSIFHM FQPIFVRAAS MKWWTLVAFE  180
PTASMMLTES QVAVAAYIFS DTLDPFEELV ISDEKDYRST FRCLVPERCV ESE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.MS5Z0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015937958.28e-84uncharacterized protein LOC107463640
TrEMBLA0A444XSA52e-73A0A444XSA5_ARAHY; Uncharacterized protein
TrEMBLA0A445CDK21e-74A0A445CDK2_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.18e-08FAR1-related sequence 10