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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Aradu.MXJ1E | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | bZIP | ||||||||
| Protein Properties | Length: 95aa MW: 11614.2 Da PI: 6.0213 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 28.1 | 4.4e-09 | 19 | 81 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+el++err++ NR +r R+R ++ +eLe v++L +e + L +el +l ke ++l+ e+
Aradu.MXJ1E 19 EEELRKERRREANRRCVQRKRKREQETFQELEGSVAKLRTEVQLLHEELTRLDKENKELDEEN 81
799********************************************************9998 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:1.20.5.170 | 5.9E-9 | 14 | 78 | No hit | No description |
| Pfam | PF00170 | 1.2E-7 | 19 | 81 | IPR004827 | Basic-leucine zipper domain |
| SMART | SM00338 | 3.9E-4 | 19 | 83 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 10.565 | 21 | 84 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 4.29E-8 | 22 | 77 | No hit | No description |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 95 aa Download sequence Send to blast |
MEEKVPQLII RFKLSKPKEE ELRKERRREA NRRCVQRKRK REQETFQELE GSVAKLRTEV 60 QLLHEELTRL DKENKELDEE NNSIQVDYEF ACLDL |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 25 | 40 | RRREANRRCVQRKRKR |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | Aradu.MXJ1E |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_016183444.1 | 1e-34 | G-box-binding factor 1-like isoform X1 | ||||
| Refseq | XP_016183447.1 | 1e-34 | G-box-binding factor 1-like isoform X1 | ||||
| Refseq | XP_025627007.1 | 2e-34 | G-box-binding factor 1 isoform X1 | ||||
| Refseq | XP_025627008.1 | 2e-34 | G-box-binding factor 1 isoform X1 | ||||
| Refseq | XP_025627009.1 | 1e-34 | G-box-binding factor 1 isoform X2 | ||||
| Refseq | XP_025627010.1 | 1e-34 | G-box-binding factor 1 isoform X2 | ||||
| TrEMBL | A0A445E3N4 | 1e-49 | A0A445E3N4_ARAHY; Uncharacterized protein | ||||




