PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.N3VMQ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 88aa    MW: 9856.87 Da    PI: 4.4693
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.N3VMQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.73.9e-085288240
         FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40
                  Y++YAk++GFs+r+++++++   +ei+++  +Cs+egk
  Aradu.N3VMQ 52 VYRNYAKTAGFSTRVRSTNRK--GNEIKNQLITCSREGK 88
                 7***************98887..8889**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.1E-55288IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MDDSTSDCQL NPGEVDYEFE SNEVPEPLSV VDDQFVPKVG MTFTTLEDAG KVYRNYAKTA  60
GFSTRVRSTN RKGNEIKNQL ITCSREGK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.N3VMQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371787e-75HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020989500.16e-51uncharacterized protein LOC110276745
RefseqXP_020997160.11e-50protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997362.13e-50protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445DBP57e-59A0A445DBP5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.11e-07FAR1-related sequence 10