PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.N5DK2

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 173aa MW: 19805.7 Da PI: 7.5821

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.N5DK2	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.2	2.1e-06	1	34	4	40
HHHHHHHHHHHHHHHHHHHHHCTSCCC......TTS-STC CS HLH 4 ahnerErrRRdriNsafeeLrellPkas...kapskKlsK 40 +h e Er+RR+++ + ++Lr+llP + + +K Aradu.N5DK2 1 MHRETERQRRQEMGKLCATLRSLLPLEYiklQ------NK 34 599**********************9743442......33 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.017	1	48	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.82E-6	2	49	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.9E-4	2	34	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence Send to blast
MHRETERQRR QEMGKLCATL RSLLPLEYIK LQNKVKKLQA KRDELKKHFS DLNNNAIHDD 60 EDESILHLPP YVVVHPLQGV GVEIICSYSF KKCLCPLSRL LHILIGEGLN IINTISTKKN 120 GRFIHTIQSE DPNISSSADY SELQRKLTEA ISSSSSLPET LIRPEENINI SEY

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.N5DK2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025701888.1	1e-111	transcription factor bHLH36
TrEMBL	A0A445CZN9	1e-110	A0A445CZN9_ARAHY; Uncharacterized protein
STRING	GLYMA09G27610.1	4e-57	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF792	33	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	2e-24	bHLH family protein