PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.N5G83
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 230aa    MW: 26315.4 Da    PI: 5.642
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.N5G83genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1743.2e-2384178190
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fYneY++  GFs+r+sk  +      +g+i+++ fvCs++g+r+ ++ + ++++  +r++tr+gC+a++kv+ ++ +++w+v+ ++ eHnH++ 
  Aradu.N5G83  84 DFYNEYGRIKGFSIRRSKVGRCkkaGSEGNIIWQIFVCSRQGERDAKHVHrNDRKMDPRPVTRCGCNARIKVHVDSrNERWYVDFFSDEHNHDML 178
                  6***************98766622256789**************9998774677778******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.9E-2184178IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MEGTEEVSSN FQENVTAGVE EDPIENGNFV AETESVPIGA SQSDDQRDVI FLDGIGSFGV  60
IDFDALRDEE IMMIEFVDLK TAYDFYNEYG RIKGFSIRRS KVGRCKKAGS EGNIIWQIFV  120
CSRQGERDAK HVHRNDRKMD PRPVTRCGCN ARIKVHVDSR NERWYVDFFS DEHNHDMLEA  180
RFRGMMQSHR AIKTGDLHQI NTMRSSGLRV PTIFRAFANQ NGGFEMVGFQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.N5G83
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015964554.11e-165protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025702767.11e-167protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445D6S41e-166A0A445D6S4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-17FAR1-related sequence 5