PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.N5UYC
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GRF
Protein Properties Length: 391aa    MW: 42804.9 Da    PI: 9.0464
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.N5UYCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.51.3e-24262306145
          WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                  d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e 
  Aradu.N5UYC 262 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEG 306
                  79****************************************986 PP
2QLQ56.39.9e-20193223232
          QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLl 32 
                   FT++Q+++L++Q+l+yKy+ an+PvP++L+
  Aradu.N5UYC 193 LFTPSQWMELEHQALIYKYITANVPVPSHLI 223
                  6****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.1E-9192228IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166620.663193228IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088803.7E-14194223IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.847262306IPR014977WRC domain
PfamPF088796.8E-21263305IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MDLGVVGSEA GFVPFGSGFV KHQRSEEEVS NNDHNNRRGA KLSKVNITSG DDDDVITTTT  60
SKGMLFFQNH QRNNNNNSSC CNVLLRSNNN NNNNNNNNNN NNNNNGNDNV AIALFKQEGE  120
EKMLSFSTTP TPKSETLIVE KASSNATLHT SYHPFSSYNI NNNAGYNNSN WGMMMMGNSS  180
SNNNVGRVVG AALFTPSQWM ELEHQALIYK YITANVPVPS HLIPITKALH STSPFSNFPN  240
PLLRPNPLGW GGFHLGFSSS TDPEPGRCRR TDGKKWRCSR DAVVDQKYCE RHMNRGRHRS  300
RKPVEGQSGH AAAITTTTTT TTTTSNSKLL LPNSNNSSSS FSIVGNTASN NNSNTISFGN  360
CHEHKNVIQQ QQPVASDASA ANNISRCATN Y
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.N5UYC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020990950.10.0growth-regulating factor 1 isoform X2
TrEMBLA0A445EBX80.0A0A445EBX8_ARAHY; Uncharacterized protein
STRINGXP_004498953.15e-87(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20853481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.13e-46growth-regulating factor 2