PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.NEU1C
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 255aa    MW: 29566.9 Da    PI: 5.3874
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.NEU1CgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM126.52.1e-3971291128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                  lp+G+rF+Pt+ee++ +yL++k  g++ e++++i++vd+++++PwdLp + kvk++++ew+fF +   ky ++kr nr+t+ gyWk tgk++  +   
  Aradu.NEU1C   7 LPVGYRFRPTEEEILIHYLNNKHLGNDAEIKNTISQVDLCNFDPWDLPeQsKVKSDDQEWFFFNEL--KYMKNKRCNRKTNMGYWKITGKERIGT--- 99 
                  799***************************999**************95258899999*****886..778899****************76544... PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  ++++g+k+tLvfy  ++p+ +kt+Wv+hey++
  Aradu.NEU1C 100 DSVIGTKRTLVFY--ERPHNVKTNWVLHEYHA 129
                  589**********..688889*********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-404147IPR003441NAC domain
PROSITE profilePS5100540.6087149IPR003441NAC domain
PfamPF023651.1E-228128IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MAETRVLPVG YRFRPTEEEI LIHYLNNKHL GNDAEIKNTI SQVDLCNFDP WDLPEQSKVK  60
SDDQEWFFFN ELKYMKNKRC NRKTNMGYWK ITGKERIGTD SVIGTKRTLV FYERPHNVKT  120
NWVLHEYHAF DQKVGSCQSN IVLSRVIMNA EKREQKLKTK ASNIVEEEEA CVSSERQQPQ  180
VIDYEILSSG QQSSVAHSGN ENNNAAEATW RQDADMNIEY FWNLLFSSID ADPHAEFLNS  240
VLAGDDQLYV DSGHH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-27714617162NO APICAL MERISTEM PROTEIN
1ut4_B4e-27714617162NO APICAL MERISTEM PROTEIN
1ut7_A4e-27714617162NO APICAL MERISTEM PROTEIN
1ut7_B4e-27714617162NO APICAL MERISTEM PROTEIN
3swm_A4e-27714620165NAC domain-containing protein 19
3swm_B4e-27714620165NAC domain-containing protein 19
3swm_C4e-27714620165NAC domain-containing protein 19
3swm_D4e-27714620165NAC domain-containing protein 19
3swp_A4e-27714620165NAC domain-containing protein 19
3swp_B4e-27714620165NAC domain-containing protein 19
3swp_C4e-27714620165NAC domain-containing protein 19
3swp_D4e-27714620165NAC domain-containing protein 19
3ulx_A5e-27712815139Stress-induced transcription factor NAC1
4dul_A4e-27714617162NAC domain-containing protein 19
4dul_B4e-27714617162NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.NEU1C
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold, heat and drought stresses. {ECO:0000269|PubMed:17158162}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020990492.10.0NAC domain-containing protein 14-like isoform X1
SwissprotB5X5702e-38NAC14_ARATH; NAC domain-containing protein 14
TrEMBLA0A445EHL31e-177A0A445EHL3_ARAHY; Uncharacterized protein
STRINGAES846271e-47(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.16e-41NAC 014