PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.NI44V
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 330aa    MW: 36993.1 Da    PI: 8.6171
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.NI44VgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.6e-093983345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     rWT+eE +l+ +a + + ++   +W+ +a++++ g+t  +++  + 
      Aradu.NI44V 39 RWTPEENKLFENALAVHDKDtpdRWHQVAAMIP-GKTVGDVIKQYK 83
                     9********************************.****99988775 PP
2Myb_DNA-binding44.53.5e-14147191347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
      Aradu.NI44V 147 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 191
                      8*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.8E-43382IPR009057Homeodomain-like
PROSITE profilePS5129310.0353590IPR017884SANT domain
SMARTSM007179.4E-103688IPR001005SANT/Myb domain
SuperFamilySSF466894.67E-113892IPR009057Homeodomain-like
PfamPF002491.1E-73983IPR001005SANT/Myb domain
CDDcd001679.68E-83985No hitNo description
PROSITE profilePS5129420.486140196IPR017930Myb domain
SuperFamilySSF466898.61E-17141195IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-17143195IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.603.9E-12144191IPR009057Homeodomain-like
SMARTSM007175.3E-13144194IPR001005SANT/Myb domain
PfamPF002491.2E-12147191IPR001005SANT/Myb domain
CDDcd001679.25E-11147192No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MKWEMEILSP TTTPYNPNSN LSNTNNTFNW LLGDGRSTRW TPEENKLFEN ALAVHDKDTP  60
DRWHQVAAMI PGKTVGDVIK QYKELEVDVC NIEAGLIPVP GYSTTSPFTL EWVNSQGYDD  120
GFKGLSGKRP SSCSVKPPEQ ERKKGVPWTE EEHKLFLLGL KKYGKGDWRN ISRNFVITRT  180
PTQVASHAQK YFIRQLSGGK DKRRASIHDI TTVNVTETGT SSSEDTKSSM MLSQQQQQQN  240
SSSAATIPRT HHFQWNNQQP NNAAGGVAME KVFNSPYGVN SFGVTIMEGQ NLNKSVESSS  300
SSSYLGPQTQ NLVFQMQQQS SQQQQHYSHA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A3e-1533105676RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.NI44V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015932099.10.0transcription factor DIVARICATA
RefseqXP_025609862.10.0transcription factor DIVARICATA
SwissprotQ8S9H71e-111DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A445C7T90.0A0A445C7T9_ARAHY; Uncharacterized protein
STRINGXP_007142227.11e-149(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46634162
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.13e-83Homeodomain-like transcriptional regulator
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]