PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.NU4UJ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 428aa    MW: 48883.2 Da    PI: 5.6312
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.NU4UJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.12e-08194243248
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 
                      + WT eE + +  +++    +    +Wkt+a++++ g+t+ q+++r++k++
      Aradu.NU4UJ 194 QVWTWEENKAFESVIASCFQDaihnHWKTVAARLP-GKTPAQLQERFLKLM 243
                      68****************999**************.************986 PP
2Myb_DNA-binding33.87.9e-11357400347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT +E++l++++ + lG+  W++I+++  k+Rt  q++s+ qk+
      Aradu.NU4UJ 357 HWTLQEHKLFLQGYEGLGKQ-WSKISSEYVKTRTYSQVVSHSQKF 400
                      6*****************99.********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.9E-8189254IPR009057Homeodomain-like
SMARTSM007173.1E-5192245IPR001005SANT/Myb domain
PfamPF002496.6E-6194242IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.5E-5195243IPR009057Homeodomain-like
PROSITE profilePS500906.795196243IPR017877Myb-like domain
CDDcd001671.85E-5196243No hitNo description
PROSITE profilePS5129413.631350405IPR017930Myb domain
SuperFamilySSF466892.44E-12351406IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-10354404IPR006447Myb domain, plants
SMARTSM007174.6E-6354403IPR001005SANT/Myb domain
PfamPF002492.3E-7357399IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.0E-6357395IPR009057Homeodomain-like
CDDcd001679.67E-4358396No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MIAEEIDDAA IIEEELNALL MMDTKEMKMM EDLFASGLDD NQQLHSWDNT LSNMDMEYNP  60
EKMKEELEAF FMMDTKENWE ETEATKHSQP QLQPHTTNFE EQCAIEVGVN QPRGLESPPQ  120
PLPLPQLESP PQPTSQSLPL PLPLPQLESP LQSQHQSKSQ TDISKMTEQF FNDTWGYQPP  180
LEMIAAVGGH QQPQVWTWEE NKAFESVIAS CFQDAIHNHW KTVAARLPGK TPAQLQERFL  240
KLMTDVNAIK NGNPENMNIM IPLPATSLEH SLLSIPVVNA TPPPPPPPPH WTHHQHHRME  300
VMAPAADMPV PMHITLLSSS MSGARREQNQ HANSNIIQHE PLHAASSNNN KRQQTVHWTL  360
QEHKLFLQGY EGLGKQWSKI SSEYVKTRTY SQVVSHSQKF FKRQEKRARG ENLGRKSMLD  420
ITDYRTII
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.NU4UJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A445EIG20.0A0A445EIG2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2382823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.12e-18MYB family protein