PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.NVQ7M
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 327aa    MW: 37192.1 Da    PI: 9.1758
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.NVQ7MgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.63.9e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed +l++ v++ G+g+W++I +   ++R++k+c++rw ++l
      Aradu.NVQ7M 14 KGPWTPREDAILIEQVEKCGKGNWSLIRKNSELRRSGKNCRLRWSNHL 61
                     79*******************************************996 PP
2Myb_DNA-binding49.11.3e-1567110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g++++eE++ ++d+++++G++ W++ a +++ gR+++++k++w++
      Aradu.NVQ7M  67 KGPFSEEEEKTIYDLHAKYGNK-WALMATKVP-GRSDNDIKNFWNS 110
                      79********************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129424.677965IPR017930Myb domain
SMARTSM007171.6E-131363IPR001005SANT/Myb domain
SuperFamilySSF466891.98E-2813108IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.2E-221568IPR009057Homeodomain-like
CDDcd001671.74E-101661No hitNo description
PfamPF139217.4E-161776No hitNo description
PROSITE profilePS5129419.07966116IPR017930Myb domain
SMARTSM007176.7E-1566114IPR001005SANT/Myb domain
CDDcd001673.00E-1069109No hitNo description
Gene3DG3DSA:1.10.10.601.9E-2469116IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MISNIDWRDD YLRKGPWTPR EDAILIEQVE KCGKGNWSLI RKNSELRRSG KNCRLRWSNH  60
LNPDLKKGPF SEEEEKTIYD LHAKYGNKWA LMATKVPGRS DNDIKNFWNS RMKKRLREYP  120
PQITVQQAQH FSSSPFYSVL ASCYPKNNLS VELPSNISAA NPPPHHNQKQ PNRNNSSSFS  180
CTNNNASFVL PLTPVSPYCK SSGLLNDVVM EGIALCRKGK SKMDATIVIG REEEELADKR  240
KIIEEPPLPP VGTSKEEETA TIIATQSSSH QLISTEKNDN GGCNNNKEAL NNSMPQMDDE  300
LLSILKNCPI YSPVRKWYKL NVITFRQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C2e-291211625128MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.NVQ7M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935995.10.0transcription factor MYB101-like
TrEMBLA0A445BWS50.0A0A445BWS5_ARAHY; Uncharacterized protein
STRINGXP_007149977.11e-55(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32460.22e-46myb domain protein 101