PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.NZ8CP
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 301aa    MW: 33757.9 Da    PI: 5.4492
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.NZ8CPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-1980128355
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  Aradu.NZ8CP  80 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 128
                  9*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.35E-2279137IPR016177DNA-binding domain
PROSITE profilePS5103223.77579136IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-3279137IPR001471AP2/ERF domain
SMARTSM003803.1E-3879142IPR001471AP2/ERF domain
PfamPF008476.1E-1280128IPR001471AP2/ERF domain
PRINTSPR003677.7E-128091IPR001471AP2/ERF domain
CDDcd000188.71E-3380137No hitNo description
PRINTSPR003677.7E-12102118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MCGGAIIAEF IPRNRSRRLT ASEIWPNTFS NNQVDDFDFD FSHHHLKNTP TLSKASSPSV  60
GEQDQENSKP PAKRQRKNLY RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN TAEEAARAYD  120
REARKIRGKK AKVNFPNEDD EYSIQQSRNV IPNVPPPIRR SSNHPPLYQY GDANNNNMNN  180
QARTLNLNLE FGYDLNHGGA VGVGDAINAD PFVSCVDENS EYGSGSGSAS GGSSGDQQHQ  240
EEKKSYEVEK LSEELMAYEN YIGFYDQMPF YDAQSAAAAA ANNNNNVVQE SVVGELWTFD  300
E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-21801381574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.NZ8CP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ0489310.0JQ048931.1 Arachis hypogaea ethylene-responsive element binding factor 4 (ERF4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968971.10.0ethylene-responsive transcription factor RAP2-3
TrEMBLA0A445CMN40.0A0A445CMN4_ARAHY; Uncharacterized protein
STRINGGLYMA02G01960.11e-107(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67713449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-34ethylene-responsive element binding protein