PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.P528Z
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 195aa    MW: 22106.7 Da    PI: 4.7571
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.P528ZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.22.3e-0775120147
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                  +fY +YAk  GF  rk+ ++   +n++i +r++vC+k g+r  ++ k
  Aradu.P528Z  75 EFYAKYAKCYGFVSRKDLKTVD-TNDNINTRQLVCNKAGERYWKHLK 120
                  6***********9998876665.7788************99877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.7E-475120IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MENDGKESYK DGDQSEDLSV EYEYSSDESD DMVDVTVDEA EADIINADGF KKLITDLTIE  60
DIWGLVFDTE SQVCEFYAKY AKCYGFVSRK DLKTVDTNDN INTRQLVCNK AGERYWKHLK  120
GTIGKRSIGQ LLVSTVGRGF GSFVTIERSE HNHQLCPPKY RHLIVVNRGF NEADKTQSDS  180
LRACGVKTCH IMGYM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.P528Z
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015941664.11e-116protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445EKY51e-100A0A445EKY5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1535229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-08FAR1-related sequence 5