PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.P5VYP
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 138aa    MW: 15951.9 Da    PI: 8.2191
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.P5VYPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR135.24.2e-113996160
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrt 60
                 +f+ +Y+ ++GF v k++s+k+  +g+i + +fvC keg r+++k++ + +  +r etrt
  Aradu.P5VYP 39 QFWIDYGGRMGFGVHKQYSNKN-ADGKILSLRFVCAKEGVRKSNKRD-SLTIIPRLETRT 96
                 699****************999.8899*****************999.555556666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.1E-83995IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MCPTKHDVQR FLNAQNMDVE FDWLPKLDKT FNTVEEAWQF WIDYGGRMGF GVHKQYSNKN  60
ADGKILSLRF VCAKEGVRKS NKRDSLTIIP RLETRTNYGV HAQEIELADD SGITQRTSFE  120
LMSRQVGGRE NIGYTRSD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.P5VYP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025616747.15e-65protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A072URK74e-40A0A072URK7_MEDTR; FAR1 DNA-binding domain protein
TrEMBLA0A2K3PRH21e-37A0A2K3PRH2_TRIPR; Protein FAR1-related sequence 5-like
STRINGAES877118e-34(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30451449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.15e-08FAR1-related sequence 12