PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.P6UBG
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 259aa    MW: 29176.2 Da    PI: 6.7325
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.P6UBGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.1e-174899155
          AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 s y+GV++++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  Aradu.P6UBG 48 SVYRGVTRHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDMAAIEYRG 99
                 78****************99966...3.6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.77E-1848109IPR016177DNA-binding domain
PfamPF008471.8E-134899IPR001471AP2/ERF domain
CDDcd000186.98E-2548109No hitNo description
PROSITE profilePS5103218.13649107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-1849108IPR001471AP2/ERF domain
SMARTSM003802.5E-2549113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MAKKKTLIIK NNDSNSSSSS SAPTPSKKVV KKRTRKTIPR DSPPQRSSVY RGVTRHHHNG  60
RWEARIGRVF GNKYLYLGTY ATQEEAAMAY DMAAIEYRGL NAVTNFDLSH YINWLRPKLQ  120
EIQKNPSHNN QEQSSSGSEL DNNQLVFGYD QVGLTTSETG SEDSTQFKTG GETVPTSALE  180
ILLKSSKLKE MLVRNSVDED NLHSQTSSES NPTPRRTFPE DIQTFFESHD SNIYTENDDI  240
IFGELGSISA PFFHYELDA
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.P6UBG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015938207.11e-155AP2-like ethylene-responsive transcription factor At1g16060
RefseqXP_025617395.11e-155AP2-like ethylene-responsive transcription factor At1g16060
SwissprotQ94AN43e-38AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLA0A444XBM01e-151A0A444XBM0_ARAHY; Uncharacterized protein
STRINGcassava4.1_025233m9e-70(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2996822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.23e-39ARIA-interacting double AP2 domain protein
Publications ? help Back to Top
  1. Todd J,Post-Beittenmiller D,Jaworski JG
    KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
    Plant J., 1999. 17(2): p. 119-30
    [PMID:10074711]
  2. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]