PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.P7CW3
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 245aa    MW: 28842.2 Da    PI: 9.3755
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.P7CW3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.41.5e-20151241190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fY++ +k  GF +r+  + k  ++g+ ++r+f C++eg+r++++ +  +++r +++etrt+C+a++ + ++k ++ w+v+k+ l+HnH+++
  Aradu.P7CW3 151 EFYKRLGKFYGFGIRRGDMFKD-EKGNLVRRRFFCNREGQRDKKHYNrIDRKRPHKPETRTNCEARMCIYLDKdSSLWRVKKIILNHNHNMT 241
                  6*****************9998.7777****************99985567777999***************9999*************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.2E-18151241IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MPIPVSSASA ARLSDLQLAD PLGSEWSAWW FLHAVRACTC RFCLQVSPEC RRSYWVLVFR  60
LSCRRWQKEV AENPDCLRLE GRSRRRSRPH ALRIWHCVVN ILMDVPEAVD INAMCEEGAG  120
VMGTVDFGDV ADITENDILR KVFRSEDDAY EFYKRLGKFY GFGIRRGDMF KDEKGNLVRR  180
RFFCNREGQR DKKHYNRIDR KRPHKPETRT NCEARMCIYL DKDSSLWRVK KIILNHNHNM  240
THPGM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.P7CW3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015944491.13e-99protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020981435.15e-97protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CEL71e-150A0A445CEL7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15343210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.12e-09FAR1-related sequence 11