PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.PEG2Q
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NF-YC
Protein Properties Length: 84aa    MW: 9857.29 Da    PI: 9.1195
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.PEG2QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC36.21.3e-112772499
        NF-YC 24 arikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99
                  ri+ i+ka++   ++s ea  ++ ka e f+ +++   ++++ + +r++l    +a +v++   ++fl d vp+ 
  Aradu.PEG2Q  2 NRIRTIVKAEDPDLRVSQEAIFVVNKAAEKFLEQFAQDGYVRCVQERRKSLSYKHLAHVVSKQRRYEFLSDFVPET 77
                 7*******98777789*********************************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008081.1E-13161IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene3DG3DSA:1.10.20.106.2E-22176IPR009072Histone-fold
SuperFamilySSF471131.61E-16977IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
MNRIRTIVKA EDPDLRVSQE AIFVVNKAAE KFLEQFAQDG YVRCVQERRK SLSYKHLAHV  60
VSKQRRYEFL SDFVPETLKA EDAL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.PEG2Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015952380.13e-57ribosomal RNA-processing protein 8 isoform X1
TrEMBLA0A445A9W01e-55A0A445A9W0_ARAHY; Uncharacterized protein
STRINGGLYMA11G20740.15e-40(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120163031
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.13e-26nuclear factor Y, subunit C10