PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Q2I1J
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 333aa    MW: 37707.8 Da    PI: 4.8389
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Q2I1JgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.4e-09141187455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   h ++Er+RR+++  ++ +L   +P +     kK++Ka + ++   YIk Lq
  Aradu.Q2I1J 141 DHIIAERKRRQDLTRSIIQLSATIPGL-----KKMDKAHVIRESLSYIKILQ 187
                  699************************.....9****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.28E-7135191No hitNo description
SuperFamilySSF474598.77E-14136201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.071137186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-6141187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-12141199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-8143192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MEEEEEENDD TIIMNNYSLN EEQEFLMKIF NGRPDFSSPE SSEHYYYSSP NNNNNNSYNN  60
NDPNNCDTSP NNNNSSVSFE DTRVQKSKSS NSSSSTYLLS FEPNSFKGRS RGDDGFELFE  120
ASMNKNDEGG TTKKRKGKTV DHIIAERKRR QDLTRSIIQL SATIPGLKKM DKAHVIRESL  180
SYIKILQDRV KELENQIKDR RVDSAIFIGR SQDSLSTDKS TISCEITSDN NNGGGGFNES  240
SLEIEAKVME KEVLIRIQCE KQKNNIIMLK IHAFLDKLHL SIASNSVIPF GTSTLVIITI  300
VAEMDNGGKF SMTMDELVKS LREDLMETNN NAW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133149KRKGKTVDHIIAERKRR
2145150ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Q2I1J
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015962058.20.0transcription factor NAI1-like isoform X1
TrEMBLA0A444ZQT00.0A0A444ZQT0_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF149471112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-35bHLH family protein