PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.Q7KDG

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 125aa MW: 14570.8 Da PI: 9.84

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.Q7KDG	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.6	2.3e-19	28	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk+vGF ++++ +++ +++ +++ +C++e kr+++ + ++t++ t+ +C a++ ++++k+g w ++k+ l+H+H++ Aradu.Q7KDG 28 QFYQNYAKRVGFITKIRFTRRVGKDNVPKNQMITCNREEKRKSRVSP---IEKTNPRTNYNCPARISIRLNKEGLWIISKVCLDHSHPCD 114 6***********************9***********99877...999********************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.4E-16	28	114	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence Send to blast
MESVLEEQNI EDVPKVGMCF GTIEDANQFY QNYAKRVGFI TKIRFTRRVG KDNVPKNQMI 60 TCNREEKRKS RVSPIEKTNP RTNYNCPARI SIRLNKEGLW IISKVCLDHS HPCDPEMAKL 120 LTRNK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.Q7KDG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015938509.1	1e-82	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_015961253.1	4e-82	protein FAR-RED IMPAIRED RESPONSE 1-like
Refseq	XP_016205073.1	6e-83	protein FAR1-RELATED SEQUENCE 6-like
Refseq	XP_025627791.1	6e-83	protein FAR1-RELATED SEQUENCE 6-like
TrEMBL	A0A445ETK8	2e-83	A0A445ETK8_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	2e-15	FAR1 family protein