PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Q937X
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 1025aa    MW: 114282 Da    PI: 7.3844
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Q937XgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.23.3e-12451495246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g+WT eEd ll+ +v+q+G ++W  I++ +g++Rt+ qc  r+q 
      Aradu.Q937X 451 GPWTSEEDRLLLLLVQQMGIRNWFDISKSLGTNRTPFQCLARFQR 495
                      89***************************************9995 PP
2Myb_DNA-binding40.66e-13505547346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       WT+eEd +l  av+ +G  +W ++a+ +  +Rt+ qc +rw k
      Aradu.Q937X 505 EWTKEEDAQLCSAVAIYGESNWQAVASVLE-RRTGTQCSNRWKK 547
                      6*****************************.***********98 PP
3Myb_DNA-binding40.66e-13554597146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g+ T+eEd++l  av ++G + W+ Iar ++ gRt  qc++r+ +
      Aradu.Q937X 554 KGSYTQEEDKRLTVAVMLFGRK-WNQIARFVP-GRTQCQCRDRYVN 597
                      6899****************99.*********.***********77 PP
4Myb_DNA-binding44.34e-14607648346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       WT eEd +l  a++++G   W+++a+ m+  Rt+ qc+ r+  
      Aradu.Q937X 607 GWTDEEDSRLQAAIAKHGFC-WSKVAEDMP-PRTDSQCRKRFKV 648
                      5*******************.*********.9*********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.783350442IPR017877Myb-like domain
SMARTSM007170.0061354446IPR001005SANT/Myb domain
CDDcd001670.00814357442No hitNo description
Gene3DG3DSA:1.10.10.605.0E-14357373IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.0E-14417451IPR009057Homeodomain-like
SuperFamilySSF466893.52E-20425494IPR009057Homeodomain-like
PROSITE profilePS5129418.359445501IPR017930Myb domain
SMARTSM007173.3E-12449499IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-14452501IPR009057Homeodomain-like
CDDcd001674.85E-9452497No hitNo description
PfamPF139216.6E-16453514No hitNo description
SuperFamilySSF466896.22E-24500595IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.1E-15502551IPR009057Homeodomain-like
SMARTSM007173.0E-12502551IPR001005SANT/Myb domain
PROSITE profilePS5129414.543504553IPR017930Myb domain
CDDcd001676.94E-12505549No hitNo description
PROSITE profilePS500909.094553599IPR017877Myb-like domain
SMARTSM007174.5E-12553601IPR001005SANT/Myb domain
PfamPF002491.8E-11554597IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.4E-19556606IPR009057Homeodomain-like
CDDcd001674.80E-8556599No hitNo description
SuperFamilySSF466892.53E-22579652IPR009057Homeodomain-like
PROSITE profilePS5129420.26600654IPR017930Myb domain
SMARTSM007172.8E-11604652IPR001005SANT/Myb domain
PfamPF002492.0E-12607648IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.8E-16607647IPR009057Homeodomain-like
CDDcd001671.09E-11608650No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1025 aa     Download sequence    Send to blast
MAPRADQDSL SSTDDDESDD EGLKEDLAAL SRAFDMSGAD STAPPDPVLQ VDFDDDVRGG  60
VSTAPPAAAS TDLVVRTNSD DELRNDPLLA TGDAVVSIDA VDSGGYESNE DIEYLQRLQN  120
LYKPLATLPP PSPSPPPVDV FDDDDDDVET VRAIFKRFAD YDMRGLGTMT EGDQATSPGP  180
ERDIANGSTS SVIVEGGETC PVYHDRTNST DFMTGNTEMQ HSGLAESSNP DASTVSRLPR  240
RRSSFPPLAQ ALFDALKKNR SLQKFIRSKM IEIEAKIEEN KQLRNNVKIL KDFQASCIRR  300
TGSALSLKKD PRVLLISAQK SDSKRKSPMC FGPPDNRHVA NYKMVLERFP RSLDRKKWSN  360
EEKENLMKGI KQQFQESLVI AMSSEVPHGD GNYMDSIMEY TNQVDITPEI MKKYLPDVNW  420
DKLASTHVPG RTGAECESRW LNCEDPLINH GPWTSEEDRL LLLLVQQMGI RNWFDISKSL  480
GTNRTPFQCL ARFQRSLNPS MLNREWTKEE DAQLCSAVAI YGESNWQAVA SVLERRTGTQ  540
CSNRWKKSLF PERKGSYTQE EDKRLTVAVM LFGRKWNQIA RFVPGRTQCQ CRDRYVNSLN  600
PSLKWGGWTD EEDSRLQAAI AKHGFCWSKV AEDMPPRTDS QCRKRFKVLF PDQAYLLQEA  660
RKKQKSLIAG NFVDRESERP NLTLNDFLPL PTLSPLPCDA DDENLPRKRK RKSSNEHKKF  720
RSRRPAKKTR TNHNDGKDID ESKIFNGDVN IPKRTRSKKN SRNTSVHAKE AENTKQNAEI  780
QACSGKLSRI KGAETSKNKL KNKMLKPESL STVVECSGSQ NEDNTTLSSF LHMKLNKRGL  840
KCNKNKGGAA SAFATNVVSK QVDNQSSSAE QDGLSQLCGA GGVEHLVTVQ NNSASDRLLR  900
KPENVNRLTG DEDDNEDITL DCLVGNKSKE CSQVTKGPSV LSSSKSKHAS VSLPEVHCTE  960
KAAITADCTG QSTPNLVEDR SVSPSSLAEP TTAFNAEEED ELLATFMRNK SKGARRKVKR  1020
KEGNC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C8e-274226469155MYB PROTO-ONCOGENE PROTEIN
1h89_C8e-274226469155MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1642664RKRFKVLFPDQAYLLQEARKKQK
2706711RKRKRK
3710724RKSSNEHKKFRSRRP
410141020RRKVKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Q937X
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015966956.10.0uncharacterized protein LOC107490672 isoform X1
TrEMBLA0A445D1U40.0A0A445D1U4_ARAHY; Uncharacterized protein
STRINGXP_004512739.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74413344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-173myb domain protein 4r1