PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.QAB91
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 90aa    MW: 10357.8 Da    PI: 6.7924
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.QAB91genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.8e-0916571455
                 HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 ++iN+  ++L+ llP++ + ++ K s + iL++++ +I+ Lq
  Aradu.QAB91 16 NEINDLVSRLQVLLPHLNQRTNSKHSLSKILQETCSHIRRLQ 57
                 58**************879**********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.064256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-61657IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-81674IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.3E-91770IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MSGQRSSTTG LKLTENEIND LVSRLQVLLP HLNQRTNSKH SLSKILQETC SHIRRLQKEV  60
DDLGERLALL MDSMDISDVD RRVLENFLQQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.QAB91
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027351279.16e-40transcription factor PRE4-like
TrEMBLA0A445DGN47e-57A0A445DGN4_ARAHY; Uncharacterized protein
STRINGGLYMA08G47171.14e-39(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106242439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47710.18e-19BANQUO 3