PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.QG4E2
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 294aa    MW: 34374.6 Da    PI: 9.073
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.QG4E2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.89.9e-101184190
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                 kfY++Y+k +GFs+++++++k+   +ei+++  +Cs+e k                +  ++C  ++ v+  k dg w ++k++l+H+H+++
  Aradu.QG4E2 11 KFYKDYSKLAGFSTKIRNTNKK--GDEIKNQLITCSREKKL---------------SAGINCPTRIYVHILKdDGLWIISKIVLNHSHPCC 84
                 6****************98887..889********997543...............45799********8888***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS509668.184245281IPR007527Zinc finger, SWIM-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MTFKTLEESE KFYKDYSKLA GFSTKIRNTN KKGDEIKNQL ITCSREKKLS AGINCPTRIY  60
VHILKDDGLW IISKIVLNHS HPCCLDRADI LKQHMKLSMF VHRTIENNTK ARIRPKLFED  120
RHLWIPIYLD HHFWVRMRIT QRSESMHAFF NKFVTRNSSL IQFVKQYDNY QGSSEQRERE  180
FDAADFHTII PCAAKSSIEA QFQHVEVQAQ FRGKVNCIIR SAQSALGFTA YEVVEQVSNL  240
TFNKFVVTYD AISCEVKCQC LLFYSRGILC YHSLSALSFE QVDKMAPKYI LQLE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.QG4E2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025628649.15e-95protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A445ET061e-147A0A445ET06_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.24e-18far-red elongated hypocotyls 3