PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.QPL35
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 171aa    MW: 18838.4 Da    PI: 8.4828
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.QPL35genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.32.7e-0986132149
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkte 49 
                  kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ + te
  Aradu.QPL35  86 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWRSKISPTE 132
                  6***************998776..8889************999877622 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.8E-686130IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MVCSSFTLPF SLSATRASFS ILICCFLKSK FELVLKIMDP SSSDCVLNPG EVDYGSNEVP  60
DPLSVVDDEL VPKVGMTFTT LEDAGKFYRN YAKAAGFSTR VRCTNRKGNE IKNQLITCSR  120
EGKWRSKISP TEKTNLTASC AGSFTPLLSK QSRDAQTAQG TKHVHSSYDR E
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.QPL35
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371784e-78HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.12e-66protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZDD61e-73A0A444ZDD6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.13e-06FAR1-related sequence 10