PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.QTZ74
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 499aa    MW: 56521.6 Da    PI: 9.0006
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.QTZ74genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR176.64.8e-2486176291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  fY+eY++  GF +r+ k+ k+ +ng ++++t+ C+++g+r+++  +  +++r+++++tr+gC a++++k +  +g+w+v+++++eH+Hel p
  Aradu.QTZ74  86 FYEEYSRAKGFAMRQGKKLKN-KNGDFVRYTYLCNRQGFRDKKWLEkVDRKREHKVVTRCGCPAEMRIKPKGdSGRWYVSRFVEEHSHELLP 176
                  9****************9999.7777**************9997663678888999*************9998****************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.3E-2286176IPR004330FAR1 DNA binding domain
PROSITE profilePS5096610.076308343IPR007527Zinc finger, SWIM-type
PfamPF044342.9E-5320340IPR007527Zinc finger, SWIM-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MASCSRVVNK MGSGSSEDPN SDGEMPRMVG DDEEKMVDIG MEEDEFEGFR YNQSEGIANT  60
KSDAVPVTAA DVRKMEFNSP AETTIFYEEY SRAKGFAMRQ GKKLKNKNGD FVRYTYLCNR  120
QGFRDKKWLE KVDRKREHKV VTRCGCPAEM RIKPKGDSGR WYVSRFVEEH SHELLPMKYV  180
DYLPAHRKIS DVDIAHMESM RQVGISIQKI YESIVAQAGG FNFVPFTKRD MDNEEELDFR  240
SSYGTPVLQT QFPELEKSGT VNFTREIFSR YRESLKRCVR VTILECIQGA DRCVYVTQKY  300
RRPDSRWNVV HMRRKEEFVC SCLRMESFGL PCVHILAVLV RLDFVSLPKN LVLPRWSKAA  360
KEDLCYEQLS GQYSDAGVLY RSRVGAFLQH CKRLAKVACG VVTGTTIGNI RGGVRDPVSV  420
RTKGTGRGNE PLGSRGIKRR KCSTYGCLGH RRTRCPNAPP PSAVPTQEVP DSKNKGALSG  480
ADCWSSLDPC ICGYSLVVI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1272277ESLKRC
2434439RGIKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.QTZ74
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A444YED90.0A0A444YED9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF11042217
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-19FAR1-related sequence 5