PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.QWZ7V
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 189aa    MW: 21113.8 Da    PI: 7.9426
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.QWZ7VgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1416.2e-1376153182
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 
                  kfY++YAk + Fs+r+++++++   +ei+++  +Cskegk +++ +    +++ +++   +C a++ ++  k  g w ++k++
  Aradu.QWZ7V  76 KFYRNYAKAASFSTRVRSTNRK--GNEIKNQLITCSKEGKWKSKISP---TEKANPTAGLNCPARIYIHTLKdVGAWIISKIN 153
                  6****************98887..8889*************999877...889999************998879*****9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.2E-976153IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
ICSFFFSRVF PPSSRLFFSP PFSLIIDDLT SDCQLNQGEV DYEFESNEVP EPLSVVDDQF  60
VSKVGMTFTT LEDAGKFYRN YAKAASFSTR VRSTNRKGNE IKNQLITCSK EGKWKSKISP  120
TEKANPTAGL NCPARIYIHT LKDVGAWIIS KINLFDAASV MHSNSSQYQG HVMNYQFRVP  180
AAGDNSLGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.QWZ7V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-127HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.18e-78protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445AH206e-93A0A445AH20_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-06FAR1-related sequence 10