PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.RSG9M

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 271aa MW: 30986 Da PI: 6.3114

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.RSG9M	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.9	1.1e-20	73	164	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fY +YAk GF rk+ ++ + ng+i +r++vC+k g+r+ ++ k ++++r++ra tr++Ck +++ +++ +gkw+v+ +++eHnH+l+p Aradu.RSG9M 73 EFYAKYAKCYGFMSRKDLKTV-DANGNINTRQLVCNKAGERHWKHLKrDNRQREHRAITRVNCKVRIRFIRHYrTGKWKVSVFQSEHNHPLCP 164 6*********999987655.59999**********9887664789999**********888877***************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.8E-18	73	164	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence Send to blast
MENDGKESYK DGMVDLSVEY ECSSDESDDM VDVTVDEAEA DIINAGGLEK LITDLTIEDI 60 WGLAFDTESQ VCEFYAKYAK CYGFMSRKDL KTVDANGNIN TRQLVCNKAG ERHWKHLKRD 120 NRQREHRAIT RVNCKVRIRF IRHYRTGKWK VSVFQSEHNH PLCPPKYRHL IAANRKLDEA 180 DKTQADSLRA CGVKTCHIMG YMFPVLTTCL ESFEKQAAEL YTRNIFKLVK DEIEVAGALN 240 VTECPNSGDI VEYSTSYLRL VDYRAPTSLG S

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.RSG9M

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015932831.1	1e-147	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445CHF4	1e-130	A0A445CHF4_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15352	2	9

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-20	FAR1-related sequence 5