PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.RZL74
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 185aa    MW: 21338.6 Da    PI: 10.0159
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.RZL74genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.28.1e-1150136191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++Y+k + Fs++++ +++    ++i++r  vCs+e + +++ +    + +t+++  ++C  ++ v   k  g w ++k++l+ +H+ +p
  Aradu.RZL74  50 KFYKNYSKLASFSTKIRDMNRG--GDKIKNRLIVCSREERWKSKISP---TLKTNPSAGINCPVRIYVPILKdVGLWTISKVVLNQSHPYCP 136
                  6****************99988..8889**********998887766...999***************988879**************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.2E-750136IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MNESTSNQLN ENDLDYSSKM NQADETRCVM NEQFVPKVGM ILKTLEEAGK FYKNYSKLAS  60
FSTKIRDMNR GGDKIKNRLI VCSREERWKS KISPTLKTNP SAGINCPVRI YVPILKDVGL  120
WTISKVVLNQ SHPYCPDRIE MLKQHRELSI AVRGLTYMNS SLPRSPLLGR DEKHTKEREN  180
ARIFQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.RZL74
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015955930.11e-108protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445DSI63e-96A0A445DSI6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-06FAR1 family protein